Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015942787.1_cds_XP_016486130.1_76995
CDS Infomation

[gene=LOC107806486] [db_xref=GeneID:107806486] [protein=pelargonidin 3-O-(6-caffeoylglucoside) 5-O-(6-O-malonylglucoside) 4'''-malonyltransferase-like] [protein_id=XP_016486130.1] [location=complement(90854..92179)] [gbkey=CDS]
Sequence

ATGGGTTCCCAATCTGCTGCCCTGCAAGTTAATATCTTATCCACAAAGTTCATAACACCA
TCCTCACCAACCCCAAATCACTTACAAAATTACAAGTTATCTTTCTTTGATCAAATAGCT
GAAGATGTCCACTTGCCTCTTGTTCTTTTCTATCCACCTAACGACAAAATCTCCACTACG
GATGAACAACTCGAAGAATCCCTATCTAGAGTATTAACCCATGTTTACCCGATAGCTGGT
AGATTTACAGAGGATTTTTGCTCCATAAATTGCCTTGATCAAGGGGTTAAATTTGTAAAG
GCAAATGTCAATAGTAAGCTCGATGATTTTCTTGAGCAAGCACACAAGGATGTTAATGCC
GCAGTACTTTGTTGGCCTCACGATACTTGGACTGTTGATGAAGATAATTTGGCTATTACA
CCTCTTGTTATCGTCCAAGTAACCAGATTTGAATGTGGTGGCATAGCTCTGTCAATGAGC
CATGCCCACATTGCAATGGACGGATTCTCGAGTCTTTCTTTTTTGTACGAGTGGTCCAAA
GTGTGTAGACTCGGAATTCCCACAAAAGAAATCAATTTCCTGAGCTTTAATTTGGGTGAA
ATTTTCCCTACAAGGGATTTATCTAAACTTTTACTGCCTCGTATTCCTGGAGAGAAACGT
GAAGAAAGCAAACTGGTCGCTAAGAGGTTATATATTGATGAATCTGCTATATCAAAGCTA
AGAGATGAAATGACATGTTTGAGTTTCAAACCTACGAGAGTCGAGATGATTACAGCAGTT
TTATGGAGGGCTTTGATCCGTGCTTCGGAAGCGAAAAACAGAAATATGAGGCGTTCTTTA
ATGGGAGTCCCAGTCAACTTGCGTAGTAAGATCTCTTTGCCTCAAATTGAAAAGTGTTTT
GGCAATCTTGTAGTTGATTCTCCAGTAAAATTTGTACCGGGGGAGACCGAGATGGAGCTG
CATAACTTGGTGGCATTGATAAGGGATACAGTGCAGAAAACTATTGAGTATTGCAACAAG
GAATCACCAGATGAGATAGTCTCTGCGGTTGCTGATATTTACAATGGAAGTTTCCAGGCA
AATGACTGGGGAGCCAGTCATAAAGTTGACGCATTTACGTCTTCAAGTTTGTGCAGGTTT
CCTATACTAGGAGCTGATTTTGGTTGGGGGAAACCTTGCTTGATGCATTTTGGATCCAGG
CATACTCAAACTTGTTGGTTGTATGATGCAGAGTGTGGCAATGGTGTCTGTGTGCAGGTG
GATATCAAGGAAAGTTACATGCGCTTCTTTGAATGCGACCAAGATATCAAGGCTTATTTT
AAGTGA

Peptide Sequence

PEP ID

XP_016486130.1
PEP Infomation

PREDICTED: pelargonidin 3-O-(6-caffeoylglucoside) 5-O-(6-O-malonylglucoside) 4'''-malonyltransferase-like [Nicotiana tabacum]
Sequence

MGSQSAALQVNILSTKFITPSSPTPNHLQNYKLSFFDQIAEDVHLPLVLFYPPNDKISTT
DEQLEESLSRVLTHVYPIAGRFTEDFCSINCLDQGVKFVKANVNSKLDDFLEQAHKDVNA
AVLCWPHDTWTVDEDNLAITPLVIVQVTRFECGGIALSMSHAHIAMDGFSSLSFLYEWSK
VCRLGIPTKEINFLSFNLGEIFPTRDLSKLLLPRIPGEKREESKLVAKRLYIDESAISKL
RDEMTCLSFKPTRVEMITAVLWRALIRASEAKNRNMRRSLMGVPVNLRSKISLPQIEKCF
GNLVVDSPVKFVPGETEMELHNLVALIRDTVQKTIEYCNKESPDEIVSAVADIYNGSFQA
NDWGASHKVDAFTSSSLCRFPILGADFGWGKPCLMHFGSRHTQTCWLYDAECGNGVCVQV
DIKESYMRFFECDQDIKAYFK

Transcript Sequence

Gene sequence data has not been registered.